Course Listing for Bioengineering


198 Supervised Study (1 - 5 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Consent of instructor and academic adviser
Activities: Library
Library research and directed reading under supervision of a member of the faculty with the approval of the chairperson of the department. (BIO THERAP)


200 Off-Campus Study (0 units)

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Fall, Winter, Spring
Instructor(s):Staff
Full-time study in bioengineering at another location through the UCSF/UCB Graduate Group in Bioengineering. (BIOENG PRG)


215 Laboratory Rotation (3 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Consent of instructor and Bioengineering Graduate Advisor.
Restrictions:Graduate students in Bioengineering. Activities: Laboratory
Laboratory research rotations are to allow students to become familiar with different areas of research, learn new experimental techniques, obtain experiences in unique research laboratories, and ultimately to identify a lab in which to conduct dissertation research. Rotation projects should involve independent research and be a piece of work that could lead to a presentation at a scientific meeting or become part of a peer-reviewed publication. (BIO THERAP)


221 Tissue Mechanobiology (2.5 - 3.0 units)

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Fall, Winter
Instructor(s):Staff
Restrictions:None Activities: Lecture, Independent Study
A central role for many tissues is to support physical forces (tension, compression, shear, pressure). This course will introduce the mechanisms by which cells respond to load; how these mechanisms are relevant to normal function & disease etiology; progression; prevention & treatment; an overview of tissue mechanics (relationships between force, stress/strain), mechanisms of cell/matrix interactions, examples of tissue modeling & remodeling in response to physical stimuli. (BIOENG PRG)


225 Mechanistic Modeling and Simulating of Biological Systems (2.0 units)

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Winter, Spring
Instructor(s):C. Hunt Prerequisite(s): Consent of instructor
Restrictions:none Activities: Conference
Mechanism based, computational methods for modeling & simulating living systems (cells, tissues, etc.) and their use in new therapeutic development will be contrasted with established methods. Given a problem or objective, students will learn to identify model uses, develop specifications, and then select implementations enabling developing, constructing, validating, and iteratively revising multi-attribute, hierarchical, biomimetic analogues of pharmacologically responsive biological systems. (BIOENGR)


230A Radiologic, Nuclear and Molecular Imaging Methods (3 units)

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Fall
Instructor(s):T. Lang Prerequisite(s): A background in undergraduate physical and biological sciences, and calculus, will be useful. For students from an undergraduate bioengineering program, the equivalent of BioE 165 (Signal Reconstruction) would be useful.
Restrictions:Target audience is bioengineering graduate students, advanced undergraduates in bioengineering, chemical and electrical engineering and computer sciences. This course will also be of interest to radiology fellows and residents. Activities: Lecture
This is part 1 of a three-part course, offered in fall, winter and spring quarters (or a two semester course, fall and spring). The goal of BioE230A is to familiarize students with the key aspects of radiologic imaging in the fall quarter. (BIO THERAP)


230B Physics of Medical Imaging (3 units)

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Winter
Instructor(s):Y. Seo Prerequisite(s): Undergraduate physics, chemistry, calculus and biology.
Restrictions:None. Activities: Lecture
This is the 2nd part of a three-part course, Bioengineering 230, offered in fall, winter and summer quarters. The goals are to familiarize students with the key aspects of radiologic and nuclear medicine imaging in the fall and winter quarters, respectively, and with state of the art concepts of molecular imaging in the spring quarter. For Bioengineering 230B, principles of nuclear medicine imaging will be discussed in the winter quarter. (BIO THERAP)


230C Introduction to Molecular Imaging (3 units)

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Spring
Instructor(s):E. Jones, H. VanBrocklin Prerequisite(s): Undergraduate physics, chemistry, calculus and biology.
Restrictions:None. Activities: Lecture
This is offered in the spring quarter. The goals are to familiarize students with state of the art concepts of molecular imaging. (BIO THERAP)


240 Principles of Nuclear Magnetic Resonance Imaging (3 units)

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Fall
Instructor(s):R. Henry Prerequisite(s): Baccalaureate degree in engineering or a physical science; knowledge of Fourier analysis, electromagnetic waves and radiation; or permission of instructor
Activities: Lecture
Fundamentals of nuclear magnetic resonance and magnetic resonance imaging; parameterization of image acquisition, image optimization, and display. Emphasis on Fourier imaging methods and instrumentation. (BIO THERAP)


241 Magnetic Resonance Spectroscopy (3 units)

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Winter
Instructor(s):J. Kurhanewicz Prerequisite(s): Bioengineering 240.
Activities: Lecture
This course is designed to follow Bioengineering 240, Magnetic Resonance Imaging. It will build on the fundamental aspects of magnetic resonance physics presented in the first course, but will focus on MR spectroscopy which provides metabolic and biochemical information. The course will cover basic theory, basic and advanced techniques for acquiring and processing MR spectroscopic data, and biomedical applicatios for this emerging medical modality. (BIOENG PRG)


242 Principles of Tissue Engineering (3 units)

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Fall, Winter, Spring
Instructor(s):T. Desai, J. Lotz Prerequisite(s): Consent of instructor.
Activities: Lecture, Library
Introduction to the principles of tissue engineering. Engineered matrices should emulate the physiological environment of cells. Analysis of biochemical, physico-chemical and biomechanical environment of cells; the role of cellular biomechanics in tissue engineering; biomaterials and biocompatability; synthetic scaffolds; biosurface engineering; engineered tissues and organs. (CELL&TISBI)


245 Electromagnetic Neuroimaging (3 units)

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Fall, Winter, Spring
Instructor(s):S. Nagarajan Prerequisite(s): Calculus, linear algebra, undergraduate physics (electromagnetism), or consent of instructor.
Activities: Lecture, Library
This course provides a mathematically rigorous introduction to human electromagnetic neuroimaging using electroencephalography (EEG) and magnetoencephalography (MEG). Topics include neuronal sources of EEG/MEG signals, electric head modeling, data acquisition, dynamical analysis and technioues for solving the ill-posed inverse problem. (BIO THERAP)


247 Introduction to Magnetic Resonance Imaging System and Hardware (3 units)

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Spring
Instructor(s):X. Zhang Prerequisite(s): College physics, electromagnetism, basic understanding of MRI, or consent of instructor.
Restrictions:None. Activities: Lecture
This lecture-based course offers an introduction to the fundamental aspect of MRI system and related hardware, covering magnets, gradient coils, shimming coils and RF coils. Each topic will include lectures and review of relevant literature. Students will be asked to give an oral presentation, write a report based on the chosen topic, search/review literature and attend lectures. There will be no final examination. (BIO THERAP)


249 Group Studies (1 - 8 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Graduate standing
Activities: Seminar
Advanced study in various subjects through seminars on topics to be selected each year, informal group studies of special problems, group participation in comprehensive design problems, or group research on complete problems for analysis and experimentation. (BIO THERAP)


250 Research (1 - 8 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Graduate standing
Activities: Laboratory
(BIO THERAP)


260 Translational Challenges in Medicine (1.0 units)

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Fall
Instructor(s):M. Shuman Prerequisite(s): none
Restrictions:none Activities: Seminar
The course provides an understanding of the nature of some of the technical and scientific limitations in treating people with serious diseases. Neurosurgeons, pediatric, orthopedic, and medical, surgical & neuro-oncologists will discuss the challenges they encounter in their practice, and opportunities for advancing their fields by new inventions, and discoveries. Students will actively participate in organizing the lectures and discussing potential experimental solutions to these problems. (BIOENG PRG)


270 Translational Challenges: Diagnostics, Devices &Therapeutics (2.0 units)

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Winter
Instructor(s):S. Roy
Restrictions:None Activities: Lecture
This course covers a broad range of topics in the development and operation of medical diagnostics, devices, and therapeutics and combines lectures, readings, case studies, and class discussion. It will feature regular UCSF faculty as well as industry professionals. (BIOENG PRG)


281 Biological Aspects of Bioengineering (1.0 units)

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Winter
Instructor(s):A. Abate, S. Nelson Prerequisite(s): None.
Restrictions:Graduate standing. Activities: Lecture
The objective of this course is to introduce students to the broad range of bioengineering research that is associated with biological applications. Students will be exposed to problems in cellular and molecular engineering, tissue engineering and modeling neural and complex systems. Each session will involve presentations from invited faculty members of specific areas of research. (BIOENG PRG)


285 Health Care Finance & Economics (2.0 units)

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Fall
Instructor(s):J. Spetz Prerequisite(s): None.
Restrictions:None. Activities: Lecture, Conference, Project, Web-based course work
This course focuses on how current health care financing systems and emerging trends affect strategic technology development and market decisions. This course is designed so students understand the underlying drivers of rising health spending, the policies that might slow it, and the impact of possible policies on future product markets. The course covers the fundamental components of health economics, financial analysis, and strategies to increase health care value. (BIOENGR, BIO THERAP)


297 Special Study (1 - 8 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff
Activities: Independent Study
Reading and conferences for properly qualified students under the direction of a member of the staff. (BIO THERAP)


298 Thesis (0 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Advancement to candidacy and permission of the graduate adviser
For graduate students engaged in writing the thesis for the master's degree. (BIO THERAP)


299 Dissertation (0 units)

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Fall, Winter, Spring, Summer
Instructor(s):Staff Prerequisite(s): Advancement to candidacy and permission of the graduate adviser
For graduate students engaged in writing the dissertation for the PhD degree. (BIO THERAP)